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Description : ER-tubule curvature-inducing protein *(Reticulon)
Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.001G380400.1 | |
| Cluster | HCAA Clusters: Cluster_110 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_03591 | No alias | reticulon-like protein b2 | 0.02 | Orthogroups_2024-Update | |
| A4A49_32317 | No alias | reticulon-like protein b1 | 0.02 | Orthogroups_2024-Update | |
| Brara.E02256.1 | No alias | ER-tubule curvature-inducing protein *(Reticulon) | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G101680.2 | No alias | ER-tubule curvature-inducing protein *(Reticulon) | 0.03 | Orthogroups_2024-Update | |
| Sopen10g005670 | No alias | Reticulon | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Predicted GO |
| BP | GO:0015858 | nucleoside transport | IEP | Predicted GO |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
| BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
| BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
| BP | GO:0050658 | RNA transport | IEP | Predicted GO |
| BP | GO:0051028 | mRNA transport | IEP | Predicted GO |
| BP | GO:0051168 | nuclear export | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051179 | localization | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 44 | 198 |
| No external refs found! |