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  5. Sobic.001G384600.1

Sobic.001G384600.1


Description : cellulose synthase endo-1,4-beta-glucanase *(KOR)


Gene families : OG_42_0001792 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001792_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G384600.1
Cluster HCAA Clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
266522 No alias glycosyl hydrolase 9A1 0.03 Orthogroups_2024-Update
Bradi1g09460 No alias glycosyl hydrolase 9A1 0.02 Orthogroups_2024-Update
GRMZM2G110735 No alias glycosyl hydrolase 9A1 0.05 Orthogroups_2024-Update
GRMZM2G178025 No alias Six-hairpin glycosidases superfamily protein 0.03 Orthogroups_2024-Update
Pp1s157_35V6 No alias endo- -beta-glucanase 0.02 Orthogroups_2024-Update
Pp1s35_333V6 No alias endo- -beta-glucanase 0.03 Orthogroups_2024-Update
Solyc05g005080 No alias Endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 113 585
No external refs found!