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  5. Sobic.001G391000.1

Sobic.001G391000.1


Description : A1-class (Pepsin) protease & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G391000.1
Cluster HCAA Clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
A4A49_27775 No alias aspartic proteinase-like protein 2 0.03 Orthogroups_2024-Update
Brara.B00374.1 No alias A1-class (Pepsin) protease 0.01 Orthogroups_2024-Update
Brara.B00999.1 No alias A1-class (Pepsin) protease 0.02 Orthogroups_2024-Update
Brara.I05435.1 No alias A1-class (Pepsin) protease 0.03 Orthogroups_2024-Update
Glyma.08G166000 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
Potri.010G128200 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Sobic.002G243000.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.05 Orthogroups_2024-Update
Sobic.002G325800.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 230 384
IPR032861 TAXi_N 32 203
No external refs found!