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  5. Sobic.001G397900.1

Sobic.001G397900.1


Description : MYB class-R2R3 subgroup-7 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G397900.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.03 Orthogroups_2024-Update
A4A49_28774 No alias anthocyanin regulatory c1 protein 0.02 Orthogroups_2024-Update
A4A49_31893 No alias transcription factor myb36 0.04 Orthogroups_2024-Update
At4g21440 No alias Transcription factor MYB102... 0.03 Orthogroups_2024-Update
Bradi2g11676 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
Brara.E02832.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.F02806.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Glyma.03G258700 No alias myb domain protein 3 0.04 Orthogroups_2024-Update
Glyma.04G125700 No alias myb domain protein 33 0.03 Orthogroups_2024-Update
Glyma.04G187300 No alias myb domain protein 86 0.04 Orthogroups_2024-Update
Glyma.11G133700 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
HORVU1Hr1G041280.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_7261g0010 No alias (at3g12720 : 147.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00041780-RA No alias (at4g38620 : 265.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
Potri.004G126700 No alias myb domain protein 96 0.04 Orthogroups_2024-Update
Potri.006G221500 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G141000 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Potri.015G067700 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s420_4V6 No alias myb-related transcription factor 0.02 Orthogroups_2024-Update
Seita.1G117000.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Seita.2G404100.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.06 Orthogroups_2024-Update
Sobic.001G183100.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G388700.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.06 Orthogroups_2024-Update
Solyc05g048830 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRS4_SALMI) 0.03 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen10g001230 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010588 Myb-rel_proteinP_C 195 351
IPR010588 Myb-rel_proteinP_C 130 189
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!