1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G398500.1

Sobic.001G398500.1


Description : Unknown function


Gene families : OG_42_0005683 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005683_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G398500.1

Target Alias Description ECC score Gene Family Method Actions
At4g02170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Orthogroups_2024-Update
At5g38700 No alias Cotton fiber protein [Source:UniProtKB/TrEMBL;Acc:Q570M0] 0.03 Orthogroups_2024-Update
Brara.I05564.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.02G014300 No alias Function unknown 0.06 Orthogroups_2024-Update
MA_29443g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.002G198800 No alias Function unknown 0.03 Orthogroups_2024-Update
Solyc01g079660 No alias LOW QUALITY:cotton fiber protein (AHRD V3.3 *** AT5G38700.1) 0.06 Orthogroups_2024-Update
Solyc01g079670 No alias LOW QUALITY:cotton fiber protein (AHRD V3.3 *** AT5G38700.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008480 DUF761_pln 194 228
No external refs found!