Sobic.001G404400.2


Description : transcriptional regulator *(TDF1) & MYB class-R2R3 subgroup-14 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G404400.2
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
A4A49_09862 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
At1g34670 No alias Transcription factor MYB93... 0.02 Orthogroups_2024-Update
At1g66230 No alias Transcription factor MYB20... 0.02 Orthogroups_2024-Update
At3g12720 No alias AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2] 0.03 Orthogroups_2024-Update
At4g01680 No alias Myb domain protein 55 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI4] 0.03 Orthogroups_2024-Update
At5g40350 No alias Transcription factor MYB24... 0.03 Orthogroups_2024-Update
At5g55020 No alias Transcription factor MYB120... 0.03 Orthogroups_2024-Update
Bradi1g07260 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Bradi2g04252 No alias myb domain protein 50 0.03 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Bradi3g42430 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Bradi4g04050 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Bradi5g16672 No alias myb domain protein 19 0.07 Orthogroups_2024-Update
Brara.A00330.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Brara.E03665.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.F02110.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.06 Orthogroups_2024-Update
Brara.H01124.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre02.g108350 No alias myb domain protein 1 0.01 Orthogroups_2024-Update
GRMZM2G017268 No alias myb domain protein 93 0.03 Orthogroups_2024-Update
GRMZM2G037650 No alias myb domain protein 42 0.02 Orthogroups_2024-Update
GRMZM2G048136 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
GRMZM2G106558 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
GRMZM2G159547 No alias myb domain protein 93 0.06 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.05 Orthogroups_2024-Update
Glyma.02G110000 No alias myb domain protein 16 0.04 Orthogroups_2024-Update
Glyma.07G054000 No alias myb domain protein 111 0.05 Orthogroups_2024-Update
Glyma.08G017600 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.09G261600 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.10G054700 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.11G021600 No alias myb domain protein 103 0.04 Orthogroups_2024-Update
Glyma.11G107100 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.11G142900 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.05 Orthogroups_2024-Update
Glyma.12G106400 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Glyma.19G184500 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
HORVU0Hr1G006810.2 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G008810.3 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G084170.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G081720.2 No alias transcriptional regulator *(MS188) & transcriptional... 0.05 Orthogroups_2024-Update
HORVU2Hr1G106400.3 No alias MYB class-R2R3 subgroup-3 transcription factor & MYB... 0.04 Orthogroups_2024-Update
HORVU3Hr1G056980.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G063460.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G079580.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G081770.2 No alias MYB class-R2R3 transcription factor 0.06 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G041810.5 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G057410.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g40530 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g29614 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os04g45020 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os07g48870 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
MA_121533g0010 No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_66255g0010 No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.05 Orthogroups_2024-Update
MA_7261g0010 No alias (at3g12720 : 147.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_80033g0010 No alias (at5g65790 : 232.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
PSME_00012903-RA No alias (p10290|mybc_maize : 180.0) Anthocyanin regulatory C1... 0.06 Orthogroups_2024-Update
PSME_00013410-RA No alias (at5g35550 : 181.0) TT2 encodes a R2R3 MYB domain... 0.02 Orthogroups_2024-Update
PSME_00017439-RA No alias (at3g13540 : 222.0) Encodes a member of the MYB family... 0.02 Orthogroups_2024-Update
PSME_00028312-RA No alias (at1g66230 : 243.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00031964-RA No alias (at4g13480 : 184.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00034307-RA No alias (at3g61250 : 188.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00051244-RA No alias (at1g22640 : 178.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
Potri.001G099800 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.02 Orthogroups_2024-Update
Potri.009G053900 No alias myb domain protein 46 0.02 Orthogroups_2024-Update
Potri.015G082700 No alias myb domain protein 50 0.02 Orthogroups_2024-Update
Potri.017G099500 No alias myb domain protein 121 0.02 Orthogroups_2024-Update
Seita.1G324800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.05 Orthogroups_2024-Update
Seita.2G289900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Seita.3G350800.1 No alias MYB class-R2R3 transcription factor 0.05 Orthogroups_2024-Update
Seita.5G028900.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G204400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G384800.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G358900.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G209300.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G232800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G216900.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G248700.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G062000.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G115200.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.05 Orthogroups_2024-Update
Sobic.006G159100.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.04 Orthogroups_2024-Update
Sobic.009G036500.3 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Solyc11g073120 No alias R2R3MYB transcription factor 58 0.02 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 69 110
IPR001005 SANT/Myb 14 61
No external refs found!