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  5. Sobic.001G406300.1

Sobic.001G406300.1


Description : clade B phosphatase


Gene families : OG_42_0000847 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G406300.1
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
13829 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
A4A49_39253 No alias putative protein phosphatase 2c 25 0.09 Orthogroups_2024-Update
AC208201.3_FG002 No alias Protein phosphatase 2C family protein 0.15 Orthogroups_2024-Update
GRMZM2G000603 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
GRMZM2G465287 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G014150.6 No alias clade B phosphatase 0.03 Orthogroups_2024-Update
LOC_Os03g18150 No alias protein phosphatase 2C, putative, expressed 0.06 Orthogroups_2024-Update
MA_10426697g0020 No alias (at1g07160 : 330.0) Protein phosphatase 2C family... 0.04 Orthogroups_2024-Update
MA_10429333g0010 No alias (at2g30020 : 329.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
MA_10431780g0010 No alias (at2g30020 : 326.0) Encodes AP2C1. Belongs to the clade... 0.05 Orthogroups_2024-Update
MA_153040g0010 No alias (at2g30020 : 293.0) Encodes AP2C1. Belongs to the clade... 0.04 Orthogroups_2024-Update
MA_183946g0010 No alias (at2g30020 : 299.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
MA_3395g0010 No alias (at2g30020 : 322.0) Encodes AP2C1. Belongs to the clade... 0.04 Orthogroups_2024-Update
PSME_00033474-RA No alias (at2g30020 : 310.0) Encodes AP2C1. Belongs to the clade... 0.07 Orthogroups_2024-Update
PSME_00034948-RA No alias (at2g30020 : 319.0) Encodes AP2C1. Belongs to the clade... 0.05 Orthogroups_2024-Update
PSME_00040514-RA No alias (at2g30020 : 329.0) Encodes AP2C1. Belongs to the clade... 0.04 Orthogroups_2024-Update
PSME_00040607-RA No alias (at2g30020 : 331.0) Encodes AP2C1. Belongs to the clade... 0.04 Orthogroups_2024-Update
PSME_00047258-RA No alias (at2g30020 : 317.0) Encodes AP2C1. Belongs to the clade... 0.05 Orthogroups_2024-Update
PSME_00048806-RA No alias (at2g30020 : 318.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
PSME_00056873-RA No alias (at2g30020 : 299.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
Potri.008G070400 No alias phosphatase 2C5 0.03 Orthogroups_2024-Update
Seita.7G275800.1 No alias clade B phosphatase 0.03 Orthogroups_2024-Update
Seita.9G440500.1 No alias clade B phosphatase 0.08 Orthogroups_2024-Update
Solyc06g007190 No alias Protein phosphatase 2C (AHRD V3.3 *** Q3V656_SOLTU) 0.02 Orthogroups_2024-Update
Sopen05g031070 No alias Protein phosphatase 2C 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 141 377
No external refs found!