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  5. Sobic.001G413000.2

Sobic.001G413000.2


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G413000.2
Cluster HCAA Clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
163776 No alias multidrug resistance-associated protein 5 0.02 Orthogroups_2024-Update
267218 No alias multidrug resistance-associated protein 14 0.04 Orthogroups_2024-Update
A4A49_05255 No alias abc transporter c family member 2 0.03 Orthogroups_2024-Update
A4A49_37170 No alias abc transporter c family member 8 0.04 Orthogroups_2024-Update
At2g47800 No alias ABC transporter C family member 4... 0.02 Orthogroups_2024-Update
Bradi1g47277 No alias multidrug resistance-associated protein 11 0.03 Orthogroups_2024-Update
Bradi1g48670 No alias multidrug resistance-associated protein 14 0.03 Orthogroups_2024-Update
Bradi2g12727 No alias multidrug resistance-associated protein 4 0.03 Orthogroups_2024-Update
Bradi3g00540 No alias multidrug resistance-associated protein 14 0.06 Orthogroups_2024-Update
Cre08.g369720 No alias multidrug resistance-associated protein 2 0.01 Orthogroups_2024-Update
Cre17.g734612 No alias multidrug resistance-associated protein 2 0.01 Orthogroups_2024-Update
HORVU3Hr1G024210.9 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
LOC_Os02g18700 No alias ABC transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g04920 No alias multidrug resistance-associated protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_8849g0010 No alias (at3g13080 : 1497.0) encodes an ATP-dependent MRP-like... 0.03 Orthogroups_2024-Update
Mp4g15590.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
PSME_00023720-RA No alias (at1g30400 : 187.0) glutathione S-conjugate transporting... 0.03 Orthogroups_2024-Update
Seita.4G047900.1 No alias subfamily ABCC transporter 0.05 Orthogroups_2024-Update
Seita.5G122800.1 No alias subfamily ABCC transporter 0.05 Orthogroups_2024-Update
Seita.7G043600.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Seita.8G028800.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Solyc12g036160 No alias ABC transporter family protein (AHRD V3.3 *** A0A097P9R5_HEVBR) 0.03 Orthogroups_2024-Update
Sopen01g030860 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen01g032440 No alias ABC transporter transmembrane region 0.02 Orthogroups_2024-Update
Sopen11g025470 No alias ABC transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1145 1293
IPR003439 ABC_transporter-like 519 653
IPR011527 ABC1_TM_dom 191 454
IPR011527 ABC1_TM_dom 812 1054
No external refs found!