Sobic.001G420300.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G420300.1
Cluster	HCAA Clusters: Cluster_230

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33562	No alias	dof zinc finger protein dof4.6	0.02	Orthogroups_2024-Update
Brara.C01888.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.H00201.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I00633.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
GRMZM2G042218	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
GRMZM2G327189	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.04G168300	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Glyma.11G140200	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.20G216600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
LOC_Os08g38220	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g29960	No alias	dof zinc finger domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_97259g0020	No alias	(at5g62430 : 134.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
Potri.004G038800	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
Pp1s267_24V6	No alias	cycling dof factor 2	0.03	Orthogroups_2024-Update
Pp1s26_282V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s385_53V6	No alias	ascorbate oxidase promoter-binding protein aobp	0.02	Orthogroups_2024-Update
Sobic.003G033500.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Solyc03g121400	No alias	Dof zinc finger protein14	0.04	Orthogroups_2024-Update
Sopen02g015430	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen02g035000	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g026650	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0003777	microtubule motor activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006928	movement of cell or subcellular component	IEP	Predicted GO
BP	GO:0007018	microtubule-based movement	IEP	Predicted GO
BP	GO:0007034	vacuolar transport	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0048364	root development	IEP	Predicted GO
BP	GO:0048367	shoot system development	IEP	Predicted GO
BP	GO:0048731	system development	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
BP	GO:0099402	plant organ development	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	91	146

External Links

No external refs found!

Sobic.001G420300.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation