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  5. Sobic.001G424132.1

Sobic.001G424132.1


Description : Unknown function


Gene families : OG_42_0000161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G424132.1
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G256300 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
Glyma.15G043700 No alias Protein of unknown function (DUF604) 0.02 Orthogroups_2024-Update
Glyma.16G178600 No alias Protein of unknown function (DUF604) 0.05 Orthogroups_2024-Update
Glyma.18G035900 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
HORVU3Hr1G093770.3 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G016440.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g16334 No alias fringe-related protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_66888g0010 No alias (at2g37730 : 394.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
PSME_00001834-RA No alias (at1g33250 : 408.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
PSME_00053200-RA No alias (at1g33250 : 574.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Potri.009G026300 No alias Protein of unknown function (DUF604) 0.03 Orthogroups_2024-Update
Potri.016G101200 No alias Protein of unknown function (DUF604) 0.04 Orthogroups_2024-Update
Pp1s14_121V6 No alias MYC6.16; fringe-related protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc11g065450 No alias LOW QUALITY:transferring glycosyl group transferase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006740 DUF604 198 265
No external refs found!