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  5. Sobic.001G424500.1

Sobic.001G424500.1


Description : GDP-D-mannose pyrophosphorylase *(VTC1) & GDP-D-mannose pyrophosphorylase *(VTC1) & EC_2.7 transferase transferring phosphorus-containing group


Gene families : OG_42_0001922 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G424500.1
Cluster HCAA Clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G085830.1 No alias GDP-D-mannose pyrophosphorylase *(VTC1) & GDP-D-mannose... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016779 nucleotidyltransferase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005835 NTP_transferase_dom 2 229
IPR001451 Hexapep 261 295
No external refs found!