1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G425500.1

Sobic.001G425500.1


Description : class-C-I small heat-shock-responsive protein


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G425500.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
A4A49_58185 No alias 18.2 kda class i heat shock protein 0.03 Orthogroups_2024-Update
Bradi1g53850 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g05374 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
GRMZM2G083810 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
GRMZM2G098167 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G244300 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G200000 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G200200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G068700 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G176400 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G175700 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Glyma.13G176300 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G099900 No alias 17.6 kDa class II heat shock protein 0.05 Orthogroups_2024-Update
Glyma.16G206200 No alias HSP20-like chaperones superfamily protein 0.06 Orthogroups_2024-Update
Glyma.17G224900 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Glyma.19G011400 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Glyma.20G015900 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Glyma.20G078400 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G046370.3 No alias class-C-V small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G006930.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G006940.3 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU3Hr1G020520.6 No alias class-C-II small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
LOC_Os01g04370 No alias hsp20/alpha crystallin family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426614g0010 No alias (at5g59720 : 200.0) encodes a low molecular weight heat... 0.06 Orthogroups_2024-Update
MA_10436211g0010 No alias (at1g54050 : 114.0) HSP20-like chaperones superfamily... 0.04 Orthogroups_2024-Update
MA_212053g0010 No alias (at5g59720 : 101.0) encodes a low molecular weight heat... 0.04 Orthogroups_2024-Update
MA_24774g0010 No alias (at5g59720 : 211.0) encodes a low molecular weight heat... 0.03 Orthogroups_2024-Update
MA_52700g0010 No alias (p31673|hsp21_orysa : 159.0) 17.4 kDa class I heat shock... 0.05 Orthogroups_2024-Update
Mp7g07870.1 No alias 18.5 kDa class I heat shock protein OS=Glycine max... 0.03 Orthogroups_2024-Update
Mp7g07890.1 No alias 18.5 kDa class I heat shock protein OS=Glycine max... 0.03 Orthogroups_2024-Update
Mp7g10940.1 No alias 18.5 kDa class I heat shock protein OS=Glycine max... 0.03 Orthogroups_2024-Update
PSME_00016583-RA No alias (p19242|hsp21_pea : 135.0) 17.1 kDa class II heat shock... 0.02 Orthogroups_2024-Update
PSME_00016584-RA No alias (p19242|hsp21_pea : 152.0) 17.1 kDa class II heat shock... 0.04 Orthogroups_2024-Update
PSME_00016778-RA No alias (p12810|hsp11_wheat : 140.0) 16.9 kDa class I heat shock... 0.03 Orthogroups_2024-Update
PSME_00021602-RA No alias (p19242|hsp21_pea : 160.0) 17.1 kDa class II heat shock... 0.02 Orthogroups_2024-Update
PSME_00034049-RA No alias (p12810|hsp11_wheat : 129.0) 16.9 kDa class I heat shock... 0.03 Orthogroups_2024-Update
PSME_00042165-RA No alias (p19244|hsp41_pea : 162.0) 22.7 kDa class IV heat shock... 0.03 Orthogroups_2024-Update
PSME_00051906-RA No alias (p19243|hsp11_pea : 161.0) 18.1 kDa class I heat shock... 0.03 Orthogroups_2024-Update
Potri.001G238700 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G093500 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G223900 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
Potri.008G062300 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Potri.009G039200 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Potri.009G049800 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Potri.009G147900 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G130700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G081200 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Pp1s77_290V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.5G093000.1 No alias class-C-I small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Solyc06g076540 No alias Class I heat shock protein (AHRD V3.3 *** F4YBC5_SOLNI) 0.02 Orthogroups_2024-Update
Solyc06g076570 No alias class I small heat shock protein 0.02 Orthogroups_2024-Update
Solyc09g059210 No alias Class I heat shock protein (AHRD V3.3 *-* F4YBC5_SOLNI) 0.02 Orthogroups_2024-Update
Sopen01g045370 No alias Hsp20/alpha crystallin family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 54 157
No external refs found!