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  5. Sobic.001G435500.1

Sobic.001G435500.1


Description : component *(NF-YC) of NF-Y transcription factor complex


Gene families : OG_42_0000527 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G435500.1
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
At1g56170 No alias Nuclear transcription factor Y subunit C-2... 0.03 Orthogroups_2024-Update
Glyma.03G239400 No alias nuclear factor Y, subunit C9 0.03 Orthogroups_2024-Update
PSME_00007097-RA No alias "(at1g56170 : 141.0) Encodes a protein with similarity... 0.03 Orthogroups_2024-Update
Seita.9G468100.1 No alias component *(NF-YC) of NF-Y transcription factor complex 0.05 Orthogroups_2024-Update
Solyc03g110860 No alias Nuclear transcription factor Y subunit C-1 (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen03g030050 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 36 133
No external refs found!