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  5. Sobic.001G436900.1

Sobic.001G436900.1


Description : component *(ATG9) of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG_42_0004769 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004769_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G436900.1
Cluster HCAA Clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
MA_29002g0010 No alias (at2g31260 : 231.0) Involved in autophagy, the process... 0.04 Orthogroups_2024-Update
MA_84978g0010 No alias (at2g31260 : 274.0) Involved in autophagy, the process... 0.04 Orthogroups_2024-Update
Potri.005G222800 No alias autophagy 9 (APG9) 0.02 Orthogroups_2024-Update
Seita.9G189200.1 No alias component *(ATG9) of autophagosome ATG9-2-18 membrane... 0.04 Orthogroups_2024-Update
Seita.9G469500.1 No alias component *(ATG9) of autophagosome ATG9-2-18 membrane... 0.04 Orthogroups_2024-Update
Sobic.001G192000.1 No alias component *(ATG9) of autophagosome ATG9-2-18 membrane... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0044599 AP-5 adaptor complex IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007241 Autophagy-rel_prot_9 64 557
No external refs found!