Sobic.001G437801.1

Description : subunit beta of CPN60 assembly chaperone heterodimer & subunit beta of Cpn60 chaperonin complex & chaperone *(Hsp60) & EC_3.2 glycosylase

Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G437801.1
Cluster	HCAA Clusters: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
A4A49_39526	No alias	chaperonin 60 subunit beta 4, chloroplastic	0.02	Orthogroups_2024-Update
At1g26230	No alias	Cpn60beta4 [Source:UniProtKB/TrEMBL;Acc:A0A178WH16]	0.02	Orthogroups_2024-Update
At2g28000	No alias	SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]	0.03	Orthogroups_2024-Update
At2g33210	No alias	Chaperonin CPN60-like 1, mitochondrial...	0.03	Orthogroups_2024-Update
At5g18820	No alias	Chaperonin 60 subunit alpha 2, chloroplastic...	0.03	Orthogroups_2024-Update
Bradi1g50270	No alias	chaperonin 60 beta	0.03	Orthogroups_2024-Update
Bradi4g38090	No alias	TCP-1/cpn60 chaperonin family protein	0.04	Orthogroups_2024-Update
Bradi5g02890	No alias	chaperonin-60alpha	0.03	Orthogroups_2024-Update
Bradi5g11240	No alias	TCP-1/cpn60 chaperonin family protein	0.05	Orthogroups_2024-Update
Brara.C03936.1	No alias	chaperone *(Hsp60)	0.03	Orthogroups_2024-Update
GRMZM2G015989	No alias	chaperonin 60 beta	0.03	Orthogroups_2024-Update
GRMZM2G074790	No alias	heat shock protein 60-3A	0.04	Orthogroups_2024-Update
GRMZM2G083716	No alias	chaperonin 60 beta	0.04	Orthogroups_2024-Update
GRMZM2G416120	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Glyma.01G069500	No alias	TCP-1/cpn60 chaperonin family protein	0.03	Orthogroups_2024-Update
Glyma.02G126300	No alias	TCP-1/cpn60 chaperonin family protein	0.03	Orthogroups_2024-Update
Glyma.07G221100	No alias	TCP-1/cpn60 chaperonin family protein	0.03	Orthogroups_2024-Update
Glyma.08G192700	No alias	heat shock protein 60-3A	0.03	Orthogroups_2024-Update
Glyma.10G127800	No alias	heat shock protein 60	0.04	Orthogroups_2024-Update
HORVU2Hr1G007840.7	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.02	Orthogroups_2024-Update
PSME_00000537-RA	No alias	(p21239\|rub1_brana : 764.0) RuBisCO large...	0.02	Orthogroups_2024-Update
PSME_00016110-RA	No alias	(p08926\|ruba_pea : 852.0) RuBisCO large subunit-binding...	0.03	Orthogroups_2024-Update
Potri.001G054400	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Potri.010G135100	No alias	TCP-1/cpn60 chaperonin family protein	0.05	Orthogroups_2024-Update
Pp1s15_485V6	No alias	ru large subunit-binding protein subunit beta	0.02	Orthogroups_2024-Update
Seita.3G283900.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.03	Orthogroups_2024-Update
Seita.4G010900.1	No alias	chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin...	0.04	Orthogroups_2024-Update
Seita.9G231400.1	No alias	chaperone *(Hsp60)	0.03	Orthogroups_2024-Update
Solyc03g120850	No alias	Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)	0.05	Orthogroups_2024-Update
Solyc11g069790	No alias	Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)	0.03	Orthogroups_2024-Update
Sopen03g039670	No alias	TCP-1/cpn60 chaperonin family	0.03	Orthogroups_2024-Update
Sopen03g040450	No alias	TCP-1/cpn60 chaperonin family	0.03	Orthogroups_2024-Update
Sopen05g031970	No alias	TCP-1/cpn60 chaperonin family	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
BP	GO:0005975	carbohydrate metabolic process	IEA	16Dec
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
BP	GO:0000723	telomere maintenance	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003678	DNA helicase activity	IEP	Predicted GO
MF	GO:0004386	helicase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0010564	regulation of cell cycle process	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0032200	telomere organization	IEP	Predicted GO
BP	GO:0032465	regulation of cytokinesis	IEP	Predicted GO
BP	GO:0032954	regulation of cytokinetic process	IEP	Predicted GO
BP	GO:0032955	regulation of division septum assembly	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0051128	regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051301	cell division	IEP	Predicted GO
BP	GO:0051302	regulation of cell division	IEP	Predicted GO
BP	GO:0060249	anatomical structure homeostasis	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:1901891	regulation of cell septum assembly	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000490	Glyco_hydro_17	46	369
IPR002423	Cpn60/TCP-1	560	1063

External Links

No external refs found!

Sobic.001G437801.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation