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  5. Sobic.001G438100.1

Sobic.001G438100.1


Description : 3-ketoacyl-CoA synthase *(KCS)


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G438100.1
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
At4g34510 No alias 3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UZI2] 0.02 Orthogroups_2024-Update
Bradi1g68430 No alias 3-ketoacyl-CoA synthase 1 0.03 Orthogroups_2024-Update
Bradi1g72560 No alias 3-ketoacyl-CoA synthase 10 0.03 Orthogroups_2024-Update
Brara.C04403.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
Brara.I04736.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Brara.J02699.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
GRMZM2G445602 No alias 3-ketoacyl-CoA synthase 10 0.03 Orthogroups_2024-Update
Glyma.10G241700 No alias 3-ketoacyl-CoA synthase 6 0.04 Orthogroups_2024-Update
HORVU4Hr1G063420.2 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
HORVU6Hr1G036950.4 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
LOC_Os11g37900 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.03 Orthogroups_2024-Update
MA_46113g0010 No alias (at2g26640 : 801.0) Encodes KCS11, a member of the... 0.04 Orthogroups_2024-Update
Mp1g06080.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Orthogroups_2024-Update
Potri.018G032200 No alias 3-ketoacyl-CoA synthase 11 0.03 Orthogroups_2024-Update
Pp1s21_102V6 No alias beta-ketoacyl-coa synthase family protein 0.02 Orthogroups_2024-Update
Sopen04g034040 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update
Sopen06g024120 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update
Sopen12g002790 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 423 504
IPR013601 FAE1_typ3_polyketide_synth 117 405
No external refs found!