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  5. Sobic.001G439700.2

Sobic.001G439700.2


Description : actin-depolymerizing factor


Gene families : OG_42_0000295 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G439700.2
Cluster HCAA Clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
146459 No alias actin depolymerizing factor 7 0.02 Orthogroups_2024-Update
Cre07.g339050 No alias actin depolymerizing factor 11 0.01 Orthogroups_2024-Update
GRMZM2G147775 No alias actin depolymerizing factor 5 0.02 Orthogroups_2024-Update
GRMZM2G463471 No alias actin depolymerizing factor 7 0.03 Orthogroups_2024-Update
Glyma.09G019200 No alias actin depolymerizing factor 3 0.03 Orthogroups_2024-Update
HORVU2Hr1G097130.2 No alias actin-depolymerizing factor 0.04 Orthogroups_2024-Update
MA_747503g0010 No alias (q8sag3|adf_vitvi : 177.0) Actin-depolymerizing factor... 0.04 Orthogroups_2024-Update
Mp1g17660.1 No alias actin-depolymerizing factor 0.03 Orthogroups_2024-Update
Mp3g20570.1 No alias actin-depolymerizing factor 0.02 Orthogroups_2024-Update
Potri.002G038800 No alias actin depolymerizing factor 6 0.03 Orthogroups_2024-Update
Potri.005G223800 No alias actin depolymerizing factor 6 0.02 Orthogroups_2024-Update
Seita.3G063200.1 No alias actin-depolymerizing factor 0.03 Orthogroups_2024-Update
Seita.9G033900.1 No alias actin-depolymerizing factor 0.03 Orthogroups_2024-Update
Seita.9G034000.1 No alias actin-depolymerizing factor 0.03 Orthogroups_2024-Update
Seita.9G068800.1 No alias actin-depolymerizing factor 0.03 Orthogroups_2024-Update
Solyc10g084660 No alias Actin depolymerizing factor, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
evm.model.contig_3633.1 No alias (at4g00680 : 93.6) actin depolymerizing factor 8 (ADF8);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002108 ADF-H 80 200
No external refs found!