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  5. Sobic.001G440700.1

Sobic.001G440700.1


Description : component *(Snu13) of snoRNP rRNA methylation complex & component *(SNU13) of spliceosomal U4/U6 snRNP


Gene families : OG_42_0002599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002599_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G440700.1
Cluster HCAA Clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Kfl00147_0100 kfl00147_0100_v1.... (at5g20160 : 193.0) Ribosomal protein... 0.03 Orthogroups_2024-Update
Potri.019G087100 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0017003 protein-heme linkage IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 23 110
No external refs found!