Sobic.001G445600.1

Description : mitochondrial RNA exonuclease

Gene families : OG_42_0006601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006601_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G445600.1
Cluster	HCAA Clusters: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g205809	No alias	5\'-3\' exonuclease family protein	0.02	Orthogroups_2024-Update
Seita.9G479700.1	No alias	mitochondrial RNA exonuclease	0.04	Orthogroups_2024-Update
Sopen03g015200	No alias	5'-3' exonuclease, N-terminal resolvase-like domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0003824	catalytic activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predicted GO
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR020046	5-3_exonucl_a-hlix_arch_N	94	285
IPR020045	DNA_polI_H3TH	288	384

External Links

No external refs found!