1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.001G449200.1

Sobic.001G449200.1


Description : Unknown function


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G449200.1
Cluster HCAA Clusters: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
At4g36000 No alias Pathogenesis-related thaumatin superfamily protein... 0.02 Orthogroups_2024-Update
At4g36010 No alias Pathogenesis-related thaumatin superfamily protein... 0.02 Orthogroups_2024-Update
Bradi3g21100 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g42380 No alias THAUMATIN-LIKE PROTEIN 1 0.01 Orthogroups_2024-Update
Brara.A01323.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F01364.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F01366.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J02899.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G092474 No alias osmotin 34 0.02 Orthogroups_2024-Update
Glyma.17G248300 No alias thaumatin-like protein 3 0.02 Orthogroups_2024-Update
LOC_Os03g46060 No alias thaumatin family domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g43510 No alias thaumatin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g05600 No alias thaumatin-like protein 1 precursor, putative, expressed 0.04 Orthogroups_2024-Update
MA_10432704g0010 No alias (at1g77700 : 238.0) Pathogenesis-related thaumatin... 0.02 Orthogroups_2024-Update
Mp1g25360.1 No alias Osmotin-like protein OSML13 OS=Solanum commersonii... 0.03 Orthogroups_2024-Update
Mp2g13870.1 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.04 Orthogroups_2024-Update
Mp2g24450.1 No alias Thaumatin-like protein OS=Olea europaea... 0.02 Orthogroups_2024-Update
Mp2g24470.1 No alias Thaumatin-like protein OS=Olea europaea... 0.02 Orthogroups_2024-Update
PSME_00003661-RA No alias (at4g38660 : 317.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
PSME_00032520-RA No alias (p33679|zeam_maize : 275.0) Zeamatin precursor - Zea... 0.02 Orthogroups_2024-Update
PSME_00037736-RA No alias (p31110|tlp_orysa : 206.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update
PSME_00045279-RA No alias (at1g19320 : 311.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
PSME_00054893-RA No alias (at1g19320 : 169.0) Pathogenesis-related thaumatin... 0.02 Orthogroups_2024-Update
PSME_00055738-RA No alias (at1g19320 : 285.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
PSME_00055828-RA No alias (at1g77700 : 236.0) Pathogenesis-related thaumatin... 0.02 Orthogroups_2024-Update
Potri.005G112700 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G241000 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G004800 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G000800 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G365800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G145600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G278300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.006G278300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g037730 No alias Thaumatin family 0.05 Orthogroups_2024-Update
Sopen06g029350 No alias Thaumatin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 37 269
No external refs found!