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  5. Sobic.001G450900.1

Sobic.001G450900.1


Description : UMF15-type solute transporter


Gene families : OG_42_0000520 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G450900.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g20500 No alias transporter, putative, expressed 0.02 Orthogroups_2024-Update
Seita.2G189200.1 No alias UMF15-type solute transporter 0.03 Orthogroups_2024-Update
Solyc05g051900 No alias Major facilitator superfamily transporter (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen04g029160 No alias Major Facilitator Superfamily 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR011701 MFS 22 376
No external refs found!