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  5. Sobic.001G457900.1

Sobic.001G457900.1


Description : Unknown function


Gene families : OG_42_0002987 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G457900.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
406046 No alias dentin sialophosphoprotein-related 0.04 Orthogroups_2024-Update
Bradi1g70080 No alias dentin sialophosphoprotein-related 0.03 Orthogroups_2024-Update
Glyma.04G163600 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.06G202000 No alias dentin sialophosphoprotein-related 0.03 Orthogroups_2024-Update
HORVU4Hr1G068300.11 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp3g09130.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Potri.012G061400 No alias dentin sialophosphoprotein-related 0.03 Orthogroups_2024-Update
Potri.015G056400 No alias Function unknown 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!