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  5. Sobic.001G458600.1

Sobic.001G458600.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G458600.1
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
A4A49_11561 No alias beta-glucosidase 11 0.02 Orthogroups_2024-Update
A4A49_37513 No alias beta-glucosidase 11 0.03 Orthogroups_2024-Update
At4g27830 No alias Beta-glucosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZI4] 0.03 Orthogroups_2024-Update
HORVU0Hr1G020750.15 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
PSME_00009698-RA No alias (at2g44480 : 426.0) beta glucosidase 17 (BGLU17);... 0.03 Orthogroups_2024-Update
PSME_00011816-RA No alias (at3g18080 : 295.0) B-S glucosidase 44 (BGLU44);... 0.03 Orthogroups_2024-Update
Potri.001G223500 No alias beta glucosidase 27 0.03 Orthogroups_2024-Update
Pp1s76_8V6 No alias latex cyanogenic beta glucosidase 0.02 Orthogroups_2024-Update
Seita.3G270200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G255800.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 34 506
No external refs found!