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  5. Sobic.001G463200.1

Sobic.001G463200.1


Description : substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G463200.1
Cluster HCAA Clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
156140 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
A4A49_23551 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
A4A49_28201 No alias root phototropism protein 3 0.03 Orthogroups_2024-Update
At5g48800 No alias BTB/POZ domain-containing protein At5g48800... 0.02 Orthogroups_2024-Update
Brara.G01164.1 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
GRMZM2G004523 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
GRMZM2G033267 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
GRMZM2G044359 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
GRMZM5G812926 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G135600 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.11G049800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.17G161500 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Glyma.17G163500 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.18G145000 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
LOC_Os03g41350 No alias BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.02 Orthogroups_2024-Update
LOC_Os11g02620 No alias BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
PSME_00000012-RA No alias (at2g30520 : 298.0) light inducible root phototropism 2... 0.02 Orthogroups_2024-Update
PSME_00038127-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.007G053200 No alias Phototropic-responsive NPH3 family protein 0.07 Orthogroups_2024-Update
Seita.1G217500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen02g037040 No alias NPH3 family 0.03 Orthogroups_2024-Update
Sopen02g037130 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 19 109
IPR027356 NPH3_dom 197 453
No external refs found!