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  5. Sobic.001G468700.1

Sobic.001G468700.1


Description : actin filament reorganisation factor *(JAC1) & clathrin uncoating protein *(AUL)


Gene families : OG_42_0000615 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G468700.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
A4A49_15838 No alias j domain-containing protein required for chloroplast... 0.03 Orthogroups_2024-Update
Bradi1g71310 No alias Chaperone DnaJ-domain superfamily protein 0.02 Orthogroups_2024-Update
Brara.H01896.1 No alias clathrin uncoating protein *(AUL) 0.03 Orthogroups_2024-Update
GRMZM2G077711 No alias J-domain protein required for chloroplast accumulation response 1 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!