Sobic.001G476300.1

Description : HD-ZIP I/II-type transcription factor

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G476300.1
Cluster	HCAA Clusters: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
Glyma.16G021000	No alias	homeobox 7	0.03	Orthogroups_2024-Update
Glyma.19G010100	No alias	homeobox 1	0.02	Orthogroups_2024-Update
HORVU5Hr1G081090.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os09g29460	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g23090	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
MA_128g0010	No alias	(at1g69780 : 137.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
MA_130615g0020	No alias	(at2g22430 : 152.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
Potri.001G395100	No alias	homeobox protein 52	0.02	Orthogroups_2024-Update
Potri.012G023700	No alias	homeobox 7	0.04	Orthogroups_2024-Update
Potri.014G103000	No alias	homeobox 7	0.02	Orthogroups_2024-Update
Pp1s28_46V6	No alias	homeobox-leucine zipper protein hat7	0.02	Orthogroups_2024-Update
Pp1s7_280V6	No alias	hb7 gene for putative homeobox protein variant HB7c	0.04	Orthogroups_2024-Update
Seita.9G248400.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Solyc06g053220	No alias	Homeobox leucine zipper protein (AHRD V3.3 *** B8YIB0_MIRJA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	Predicted GO
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Predicted GO
CC	GO:0016272	prefoldin complex	IEP	Predicted GO
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	125	166
IPR001356	Homeobox_dom	70	123

External Links

No external refs found!

Sobic.001G476300.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation