Sobic.001G481300.1

Description : subgroup ERF-VII transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G481300.1
Cluster	HCAA Clusters: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
80895	No alias	ethylene responsive element binding factor 2	0.02	Orthogroups_2024-Update
A4A49_03112	No alias	ethylene-responsive transcription factor crf4	0.02	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.03	Orthogroups_2024-Update
A4A49_16579	No alias	ethylene-responsive transcription factor abr1	0.02	Orthogroups_2024-Update
A4A49_20932	No alias	ethylene-responsive transcription factor erf114	0.04	Orthogroups_2024-Update
At1g01250	No alias	Ethylene-responsive transcription factor ERF023...	0.04	Orthogroups_2024-Update
At1g36060	No alias	Ethylene-responsive transcription factor ERF055...	0.03	Orthogroups_2024-Update
At2g38340	No alias	Dehydration-responsive element-binding protein 2E...	0.04	Orthogroups_2024-Update
At4g28140	No alias	Ethylene-responsive transcription factor ERF054...	0.04	Orthogroups_2024-Update
Bradi1g23756	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Bradi2g52370	No alias	erf domain protein 9	0.05	Orthogroups_2024-Update
Bradi3g18070	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
Bradi3g50490	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Brara.D01886.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.E00465.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.G02403.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.K01077.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
GRMZM2G156737	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G307152	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.01G232000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G015900	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.06G295300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G244867	No alias	ethylene-responsive element binding protein	0.04	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.13G060600	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
Glyma.13G233900	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.18G051500	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.18G262800	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
HORVU1Hr1G077680.2	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
HORVU3Hr1G026970.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU6Hr1G050520.2	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G062380.3	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
HORVU7Hr1G088790.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g54160	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g08490	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g46400	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g27930	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g09390	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g11460	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g39850	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g06770	No alias	ethylene-responsive transcription factor ERF110,...	0.03	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_120531g0010	No alias	(at1g28360 : 97.1) encodes a member of the ERF (ethylene...	0.06	Orthogroups_2024-Update
MA_42369g0010	No alias	(at5g07580 : 93.2) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00008358-RA	No alias	(at5g21960 : 122.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.05	Orthogroups_2024-Update
PSME_00009547-RA	No alias	(at4g17500 : 103.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00022946-RA	No alias	(at5g61890 : 105.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037532-RA	No alias	(at5g61890 : 129.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00052454-RA	No alias	no hits & (original description: no original description)	0.09	Orthogroups_2024-Update
PSME_00053215-RA	No alias	(at4g17490 : 92.0) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
Potri.003G121200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Seita.1G270800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.2G276200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G289200.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.001G378900.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G073100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G310600.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.005G051200.2	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Sobic.006G168200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.008G050600.2	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G151600.2	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Solyc02g077360	No alias	Ethylene Response Factor B.2	0.04	Orthogroups_2024-Update
Solyc09g089910	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen02g035420	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen06g018310	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen11g007720	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	84	133

External Links

No external refs found!

Sobic.001G481300.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation