Sobic.001G481600.2

Description : Unknown function

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G481600.2
Cluster	HCAA Clusters: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03112	No alias	ethylene-responsive transcription factor crf4	0.02	Orthogroups_2024-Update
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.03	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.02	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.02	Orthogroups_2024-Update
A4A49_20932	No alias	ethylene-responsive transcription factor erf114	0.04	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.02	Orthogroups_2024-Update
AC209257.4_FG006	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
At5g13910	No alias	LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]	0.03	Orthogroups_2024-Update
Bradi1g46690	No alias	related to AP2 12	0.02	Orthogroups_2024-Update
Bradi2g21060	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Bradi2g24175	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g57201	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g35570	No alias	C-repeat/DRE binding factor 2	0.02	Orthogroups_2024-Update
Brara.B02302.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.B03778.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Brara.C00977.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.02	Orthogroups_2024-Update
Brara.C01453.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.I00528.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.I00861.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Brara.K00197.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Cre06.g275500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Cre14.g620500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G055204	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
GRMZM2G069082	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
GRMZM2G434203	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
GRMZM5G846057	No alias	related to AP2 4	0.04	Orthogroups_2024-Update
Glyma.03G138900	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
Glyma.05G015900	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.05G062100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G063600	No alias	ethylene responsive element binding factor 1	0.05	Orthogroups_2024-Update
Glyma.05G179900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G028300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.06G148400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.07G017300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G072000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.11G053600	No alias	DREB and EAR motif protein 2	0.03	Orthogroups_2024-Update
Glyma.13G236500	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Glyma.13G236600	No alias	ERF domain protein 12	0.02	Orthogroups_2024-Update
Glyma.18G252300	No alias	ethylene-responsive element binding factor 13	0.04	Orthogroups_2024-Update
Glyma.19G035500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G115300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.20G203500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G093660.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G050520.2	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
LOC_Os03g07830	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g08460	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g10780	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_65877g0010	No alias	(at3g16280 : 101.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_98464g0010	No alias	(at1g78080 : 107.0) Encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00004941-RA	No alias	(at4g17500 : 94.7) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00022946-RA	No alias	(at5g61890 : 105.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.05	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.06	Orthogroups_2024-Update
PSME_00041851-RA	No alias	(at1g21910 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.003G079300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.005G233300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.010G186400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.014G126100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.015G023200	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Potri.015G136400	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
Pp1s14_196V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.05	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.03	Orthogroups_2024-Update
Seita.2G138400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G280400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.3G237600.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.03	Orthogroups_2024-Update
Seita.5G320400.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Seita.8G012200.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.9G500100.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G269100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.002G350500.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.004G283201.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.004G308900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.005G103000.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.006G170100.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Sobic.006G184800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.007G156700.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G016500.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc03g093530	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc04g051360	No alias	Ethylene Response Factor D.1	0.03	Orthogroups_2024-Update
Sopen02g035420	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
CC	GO:0005875	microtubule associated complex	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0008285	negative regulation of cell proliferation	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
BP	GO:0019439	aromatic compound catabolic process	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
CC	GO:0030286	dynein complex	IEP	Predicted GO
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Predicted GO
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predicted GO
BP	GO:0042127	regulation of cell proliferation	IEP	Predicted GO
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predicted GO
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Predicted GO
CC	GO:0044430	cytoskeletal part	IEP	Predicted GO
BP	GO:0046700	heterocycle catabolic process	IEP	Predicted GO
BP	GO:0048519	negative regulation of biological process	IEP	Predicted GO
BP	GO:0048523	negative regulation of cellular process	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Predicted GO
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	327	376

External Links

No external refs found!

Sobic.001G481600.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation