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  5. Sobic.001G489900.1

Sobic.001G489900.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G489900.1
Cluster HCAA Clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
A4A49_04752 No alias dof zinc finger protein dof3.5 0.02 Orthogroups_2024-Update
A4A49_13356 No alias cyclic dof factor 3 0.02 Orthogroups_2024-Update
A4A49_33562 No alias dof zinc finger protein dof4.6 0.02 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.03 Orthogroups_2024-Update
At2g28810 No alias Dof zinc finger protein DOF2.2... 0.02 Orthogroups_2024-Update
At2g46590 No alias Dof zinc finger protein DOF2.5... 0.02 Orthogroups_2024-Update
At3g61850 No alias Dof-type zinc finger DNA-binding family protein... 0.03 Orthogroups_2024-Update
At5g65590 No alias SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2] 0.04 Orthogroups_2024-Update
Bradi3g25670 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
Bradi3g29940 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Brara.G00810.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
GRMZM2G123900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.01G021100 No alias Dof-type zinc finger DNA-binding family protein 0.06 Orthogroups_2024-Update
Glyma.01G049400 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Glyma.06G124300 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.09G201000 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.12G063800 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
Glyma.12G072400 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.13G177500 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.13G230200 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.13G335200 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.15G039300 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.16G022900 No alias Dof-type zinc finger DNA-binding family protein 0.06 Orthogroups_2024-Update
Glyma.18G289700 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.19G257500 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G021290.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
LOC_Os04g58190 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_18267g0010 No alias (at5g62940 : 141.0) HCA2 induces the formation of... 0.04 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.02 Orthogroups_2024-Update
Potri.004G046100 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Pp1s12_364V6 No alias zinc finger 0.05 Orthogroups_2024-Update
Seita.3G371900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Seita.9G525000.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.001G078700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.009G153400.1 No alias transcription factor *(DOF) 0.07 Orthogroups_2024-Update
Solyc02g090310 No alias Dof zinc finger protein (AHRD V3.3 *-* W9QGW0_9ROSA) 0.04 Orthogroups_2024-Update
Solyc06g076030 No alias Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU) 0.02 Orthogroups_2024-Update
Sopen06g022000 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen06g026650 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 95 152
No external refs found!