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  5. Sobic.001G493900.1

Sobic.001G493900.1


Description : beta-galactosidase *(BGAL1) & EC_3.2 glycosylase


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G493900.1
Cluster HCAA Clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
269483 No alias beta-galactosidase 8 0.02 Orthogroups_2024-Update
At3g13750 No alias Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1] 0.03 Orthogroups_2024-Update
Bradi1g67760 No alias beta-galactosidase 8 0.02 Orthogroups_2024-Update
Brara.A03235.1 No alias beta-galactosidase *(BGAL1) 0.03 Orthogroups_2024-Update
Brara.F02262.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
GRMZM2G127123 No alias beta-galactosidase 8 0.03 Orthogroups_2024-Update
PSME_00001342-RA No alias (p45582|bgal_aspof : 989.0) Beta-galactosidase precursor... 0.02 Orthogroups_2024-Update
PSME_00001343-RA No alias (at2g28470 : 968.0) putative beta-galactosidase (BGAL8... 0.02 Orthogroups_2024-Update
Seita.6G239900.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sopen11g009460 No alias Glycosyl hydrolases family 35 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 761 838
IPR031330 Gly_Hdrlase_35_cat 34 338
No external refs found!