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  5. Sobic.001G499100.1

Sobic.001G499100.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G499100.1
Cluster HCAA Clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Brara.D00598.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.G02382.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.G03089.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J02569.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Glyma.10G205600 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
Kfl00050_0290 kfl00050_0290_v1.1 (at5g06530 : 526.0) ABC-2 type transporter family... 0.04 Orthogroups_2024-Update
PSME_00005319-RA No alias (at5g06530 : 521.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update
PSME_00037831-RA No alias (at1g31770 : 730.0) ATP-binding cassette 14 (ABCG14);... 0.02 Orthogroups_2024-Update
Pp1s65_100V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Seita.8G055700.1 No alias subfamily ABCG transporter 0.06 Orthogroups_2024-Update
Seita.9G535000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
evm.model.tig00001130.22 No alias (at5g06530 : 398.0) ABC-2 type transporter family... 0.03 Orthogroups_2024-Update
evm.model.tig00021582.39 No alias (at5g06530 : 263.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 508 717
IPR003439 ABC_transporter-like 188 337
No external refs found!