Sobic.001G508200.1

Description : subfamily ABCC transporter

Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.001G508200.1
Cluster	HCAA Clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05255	No alias	abc transporter c family member 2	0.03	Orthogroups_2024-Update
A4A49_16146	No alias	abc transporter c family member 5	0.04	Orthogroups_2024-Update
Brara.E00958.1	No alias	glutathione S-conjugate transporter & subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Brara.E02088.1	No alias	subfamily ABCC transporter	0.02	Orthogroups_2024-Update
Brara.I02816.1	No alias	subfamily ABCC transporter & glutathione S-conjugate transporter	0.02	Orthogroups_2024-Update
Brara.I04064.1	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Glyma.02G298500	No alias	multidrug resistance-associated protein 3	0.03	Orthogroups_2024-Update
Glyma.10G019000	No alias	multidrug resistance-associated protein 4	0.02	Orthogroups_2024-Update
Glyma.13G220000	No alias	multidrug resistance-associated protein 2	0.02	Orthogroups_2024-Update
Glyma.18G079600	No alias	multidrug resistance-associated protein 3	0.03	Orthogroups_2024-Update
Mp4g15590.1	No alias	subfamily ABCC transporter	0.02	Orthogroups_2024-Update
Pp1s122_170V6	No alias	multidrug resistance protein abc transporter family	0.02	Orthogroups_2024-Update
Pp1s142_27V6	No alias	multidrug resistance protein abc transporter family	0.02	Orthogroups_2024-Update
Seita.5G163300.1	No alias	subfamily ABCC transporter	0.02	Orthogroups_2024-Update
Seita.7G241100.1	No alias	glutathione S-conjugate transporter & subfamily ABCC transporter	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004525	ribonuclease III activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	321	585
IPR011527	ABC1_TM_dom	953	1192
IPR003439	ABC_transporter-like	649	783
IPR003439	ABC_transporter-like	1286	1434

External Links

No external refs found!