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  5. Sobic.001G508800.1

Sobic.001G508800.1


Description : EC_3.2 glycosylase & beta amylase


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G508800.1
Cluster HCAA Clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
A4A49_35845 No alias beta-amylase 1, chloroplastic 0.03 Orthogroups_2024-Update
At2g32290 No alias Beta-amylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L762] 0.03 Orthogroups_2024-Update
At5g18670 No alias Inactive beta-amylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYW2] 0.02 Orthogroups_2024-Update
Bradi3g33730 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
Glyma.09G168300 No alias beta-amylase 1 0.02 Orthogroups_2024-Update
Glyma.11G039400 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
Glyma.12G197100 No alias beta-amylase 6 0.04 Orthogroups_2024-Update
HORVU1Hr1G038920.3 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU2Hr1G043920.3 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
HORVU4Hr1G000520.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
MA_124514g0010 No alias (at3g23920 : 732.0) Encodes a chloroplast beta-amylase.... 0.03 Orthogroups_2024-Update
PSME_00015945-RA No alias (at3g23920 : 523.0) Encodes a chloroplast beta-amylase.... 0.03 Orthogroups_2024-Update
PSME_00017705-RA No alias (at4g17090 : 655.0) Encodes a beta-amylase targeted to... 0.03 Orthogroups_2024-Update
PSME_00048762-RA No alias (at3g23920 : 741.0) Encodes a chloroplast beta-amylase.... 0.03 Orthogroups_2024-Update
Sobic.002G329400.1 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
Solyc07g052690 No alias Beta-amylase (AHRD V3.3 *-* K4CFG8_SOLLC) 0.03 Orthogroups_2024-Update
Solyc08g007130 No alias Beta-amylase (AHRD V3.3 *** K4CIK0_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA 16Dec
MF GO:0016161 beta-amylase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 103 523
No external refs found!