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  5. Sobic.001G512300.1

Sobic.001G512300.1


Description : voltage-gated anion channel *(VDAC)


Gene families : OG_42_0000558 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000558_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G512300.1
Cluster HCAA Clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
A4A49_37569 No alias mitochondrial outer membrane protein porin of 36 kda 0.02 Orthogroups_2024-Update
At3g01280 No alias Mitochondrial outer membrane protein porin 1... 0.03 Orthogroups_2024-Update
Cre01.g013700 No alias voltage dependent anion channel 4 0.02 Orthogroups_2024-Update
Cre05.g241950 No alias voltage dependent anion channel 4 0.01 Orthogroups_2024-Update
GRMZM2G137985 No alias voltage dependent anion channel 2 0.03 Orthogroups_2024-Update
Glyma.18G125500 No alias voltage dependent anion channel 1 0.05 Orthogroups_2024-Update
MA_147637g0010 No alias (p42056|vdac2_soltu : 240.0) 36 kDa outer mitochondrial... 0.05 Orthogroups_2024-Update
PSME_00019501-RA No alias (p42056|vdac2_soltu : 399.0) 36 kDa outer mitochondrial... 0.03 Orthogroups_2024-Update
Potri.014G016300 No alias voltage dependent anion channel 2 0.03 Orthogroups_2024-Update
Solyc03g058920 No alias Mitochondrial outer membrane porin (AHRD V3.3 *** VDAC1_WHEAT) 0.04 Orthogroups_2024-Update
Sopen03g012820 No alias Eukaryotic porin 0.02 Orthogroups_2024-Update
evm.model.contig_3391.2 No alias (p42056|vdac2_soltu : 90.5) 36 kDa outer mitochondrial... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 5 260
No external refs found!