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  5. Sobic.001G512800.1

Sobic.001G512800.1


Description : aconitase *(ACO) & aconitase & EC_4.2 carbon-oxygen lyase


Gene families : OG_42_0001446 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G512800.1
Cluster HCAA Clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G080600 No alias aconitase 1 0.02 Orthogroups_2024-Update
Potri.014G153400 No alias aconitase 3 0.05 Orthogroups_2024-Update
evm.model.tig00021098.30 No alias (at4g35830 : 594.0) Encodes an aconitase that can... 0.01 Orthogroups_2024-Update
evm.model.tig00021098.31 No alias (q6yzx6|acoc_orysa : 522.0) Putative aconitate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 158 661
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 790 918
No external refs found!