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  5. Sobic.001G516000.1

Sobic.001G516000.1


Description : Unknown function


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G516000.1
Cluster HCAA Clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
A4A49_31315 No alias endochitinase b 0.03 Orthogroups_2024-Update
At4g01700 No alias At4g01700 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI6] 0.04 Orthogroups_2024-Update
Brara.C03413.1 No alias basic chitinase *(CHIB) 0.02 Orthogroups_2024-Update
GRMZM2G099454 No alias basic chitinase 0.03 Orthogroups_2024-Update
Glyma.02G007400 No alias Chitinase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G052430.6 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00050349-RA No alias (p52403|chi1_soltu : 337.0) Endochitinase 1 precursor... 0.03 Orthogroups_2024-Update
Potri.014G111800 No alias Chitinase family protein 0.04 Orthogroups_2024-Update
Potri.T175200 No alias basic chitinase 0.05 Orthogroups_2024-Update
Seita.3G250400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.4G286000.1 No alias basic chitinase *(CHIB) 0.05 Orthogroups_2024-Update
Seita.9G339100.1 No alias Unknown function 0.1 Orthogroups_2024-Update
Sobic.006G078200.1 No alias basic chitinase *(CHIB) 0.03 Orthogroups_2024-Update
Solyc10g055780 No alias Endochitinase (Chitinase) (AHRD V3.3 *** Q43184_SOLTU) 0.03 Orthogroups_2024-Update
Solyc10g055810 No alias chitinase Z15140 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA 16Dec
BP GO:0006032 chitin catabolic process IEA 16Dec
BP GO:0016998 cell wall macromolecule catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 32 249
No external refs found!