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  5. Sobic.001G532000.1

Sobic.001G532000.1


Description : substrate adaptor of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000800 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G532000.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
A4A49_35789 No alias f-box protein pp2-a13 0.05 Orthogroups_2024-Update
At3g61060 No alias Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33] 0.03 Orthogroups_2024-Update
Brara.C01840.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.F00840.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.I01211.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
LOC_Os03g02550 No alias OsFBX76 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.006G117600 No alias phloem protein 2-A15 0.04 Orthogroups_2024-Update
Pp1s403_1V6 No alias T16F16.2; F-box family protein / SKP1 interacting... 0.03 Orthogroups_2024-Update
Seita.2G281600.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.05 Orthogroups_2024-Update
Seita.9G567400.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.05 Orthogroups_2024-Update
Sobic.001G321500.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sopen01g037470 No alias Phloem protein 2 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 123 281
No external refs found!