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  5. Sobic.001G532200.1

Sobic.001G532200.1


Description : protease *(RBL)


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G532200.1
Cluster HCAA Clusters: Cluster_447

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G132800 No alias RHOMBOID-like 1 0.02 Orthogroups_2024-Update
PSME_00034704-RA No alias (at2g29050 : 143.0) RHOMBOID-like 1 (RBL1); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.002G090400 No alias Rhomboid-related intramembrane serine protease family protein 0.01 Orthogroups_2024-Update
Solyc03g026080 No alias Rhomboid-like protein (AHRD V3.3 *** K4BF81_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 109 251
No external refs found!