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  5. Sobic.001G538000.1

Sobic.001G538000.1


Description : xyloglucan endotransglucosylase/hydrolase *(XTH) & EC_2.4 glycosyltransferase


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G538000.1
Cluster HCAA Clusters: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
A4A49_31112 No alias putative xyloglucan endotransglucosylasehydrolase protein 0.03 Orthogroups_2024-Update
At2g06850 No alias Xyloglucan endotransglucosylase/hydrolase protein 4... 0.03 Orthogroups_2024-Update
Bradi1g27867 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Bradi1g33810 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.03 Orthogroups_2024-Update
GRMZM2G392125 No alias xyloglucan endotransglucosylase/hydrolase 24 0.03 Orthogroups_2024-Update
Glyma.13G095000 No alias Xyloglucan endotransglucosylase/hydrolase family protein 0.02 Orthogroups_2024-Update
Glyma.17G065300 No alias xyloglucan endotransglycosylase 6 0.04 Orthogroups_2024-Update
MA_10251013g0010 No alias (q39857|xth_soybn : 462.0) Probable xyloglucan... 0.03 Orthogroups_2024-Update
MA_11177g0010 No alias (at5g57550 : 312.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_476450g0010 No alias (at5g65730 : 440.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_781557g0010 No alias (at5g13870 : 271.0) EXGT-A4, endoxyloglucan... 0.04 Orthogroups_2024-Update
MA_96657g0010 No alias (at5g57550 : 317.0) xyloglucan... 0.05 Orthogroups_2024-Update
Mp4g00700.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
PSME_00019699-RA No alias (q39857|xth_soybn : 456.0) Probable xyloglucan... 0.02 Orthogroups_2024-Update
PSME_00023360-RA No alias (p35694|bru1_soybn : 312.0) Brassinosteroid-regulated... 0.02 Orthogroups_2024-Update
PSME_00033686-RA No alias (at2g36870 : 309.0) xyloglucan... 0.02 Orthogroups_2024-Update
PSME_00047162-RA No alias (at4g03210 : 301.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
Potri.011G077300 No alias xyloglucan endotransglucosylase/hydrolase 16 0.04 Orthogroups_2024-Update
Pp1s122_57V6 No alias brassinosteroid-regulated protein bru1 0.02 Orthogroups_2024-Update
Pp1s195_28V6 No alias xyloglucan endotransglycosylase 0.02 Orthogroups_2024-Update
Seita.4G246400.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Seita.8G142000.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc07g006850 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc07g006860 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen03g023900 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update
Sopen11g025320 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
CC GO:0005618 cell wall IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
BP GO:0006073 cellular glucan metabolic process IEA 16Dec
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA 16Dec
CC GO:0048046 apoplast IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR000757 GH16 80 265
IPR010713 XET_C 301 336
No external refs found!