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  5. Sobic.001G541300.1

Sobic.001G541300.1


Description : Unknown function


Gene families : OG_42_0000126 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G541300.1
Cluster HCAA Clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
A4A49_13176 No alias 14 kda proline-rich protein dc2.15 0.04 Orthogroups_2024-Update
Brara.A01296.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03074.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C02705.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I01448.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.01G078800 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Glyma.05G057800 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Glyma.14G115500 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Orthogroups_2024-Update
Glyma.17G140300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Orthogroups_2024-Update
Glyma.17G140400 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Orthogroups_2024-Update
Glyma.17G212200 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Orthogroups_2024-Update
HORVU2Hr1G099470.5 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os10g09920 No alias LTPL132 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
LOC_Os10g40520 No alias LTPL145 - Protease inhibitor/seed storage/LTP family... 0.02 Orthogroups_2024-Update
Potri.001G158400 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Potri.014G059800 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Potri.016G015500 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Seita.7G233800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G260500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G327700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc06g060640 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Solyc08g005960 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Orthogroups_2024-Update
Solyc08g074480 No alias 14 kDa proline-rich protein DC2.15 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc08g078900 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Solyc08g078940 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Sopen01g036690 No alias Hydrophobic seed protein 0.04 Orthogroups_2024-Update
Sopen08g023130 No alias Hydrophobic seed protein 0.03 Orthogroups_2024-Update
Sopen08g027650 No alias Hydrophobic seed protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed_dom 68 150
No external refs found!