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  5. Sobic.001G541900.2

Sobic.001G541900.2


Description : nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G541900.2
Cluster HCAA Clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Bradi2g56347 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Brara.G01613.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Glyma.18G064900 No alias peptide transporter 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G008580.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
LOC_Os06g49250 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
Mp8g09440.1 No alias anion transporter (NRT1/PTR) 0.03 Orthogroups_2024-Update
PSME_00019452-RA No alias (at5g46040 : 570.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00048093-RA No alias (at5g46040 : 575.0) Major facilitator superfamily... 0.02 Orthogroups_2024-Update
Seita.9G297200.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.001G276100.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Sopen09g033390 No alias POT family 0.02 Orthogroups_2024-Update
Sopen10g034400 No alias POT family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 111 548
No external refs found!