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  5. Sobic.001G542500.2

Sobic.001G542500.2


Description : EC_2.4 glycosyltransferase & callose synthase


Gene families : OG_42_0000121 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G542500.2
Cluster HCAA Clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
At2g31960 No alias Callose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL03] 0.03 Orthogroups_2024-Update
Bradi1g51757 No alias glucan synthase-like 8 0.04 Orthogroups_2024-Update
Bradi1g77247 No alias glucan synthase-like 10 0.1 Orthogroups_2024-Update
Bradi2g50140 No alias glucan synthase-like 1 0.03 Orthogroups_2024-Update
GRMZM2G430680 No alias glucan synthase-like 12 0.03 Orthogroups_2024-Update
Glyma.08G361500 No alias glucan synthase-like 12 0.05 Orthogroups_2024-Update
Glyma.13G297100 No alias glucan synthase-like 5 0.02 Orthogroups_2024-Update
Glyma.20G244900 No alias glucan synthase-like 10 0.04 Orthogroups_2024-Update
HORVU6Hr1G095090.27 No alias EC_2.4 glycosyltransferase & callose synthase 0.03 Orthogroups_2024-Update
HORVU7Hr1G003460.9 No alias EC_2.4 glycosyltransferase & callose synthase 0.02 Orthogroups_2024-Update
MA_10426192g0010 No alias (at2g31960 : 520.0) encodes a protein similar to callose... 0.02 Orthogroups_2024-Update
PSME_00001231-RA No alias (at2g36850 : 1529.0) Encodes GSL8, a member of the... 0.04 Orthogroups_2024-Update
PSME_00001242-RA No alias (at3g07160 : 348.0) Encodes GSL10, a member of the... 0.03 Orthogroups_2024-Update
Pp1s13_432V6 No alias transferring glycosyl 0.04 Orthogroups_2024-Update
Pp1s40_186V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s88_136V6 No alias transferring glycosyl 0.04 Orthogroups_2024-Update
Seita.9G290700.1 No alias EC_2.4 glycosyltransferase & callose synthase 0.05 Orthogroups_2024-Update
Seita.9G564400.1 No alias EC_2.4 glycosyltransferase & callose synthase 0.06 Orthogroups_2024-Update
Solyc01g006350 No alias Callose synthase-like protein (AHRD V3.3 *-* A0A072VRY1_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA 16Dec
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA 16Dec
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003440 Glyco_trans_48 1034 1418
IPR026899 FKS1-like_dom1 358 465
No external refs found!