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  5. Sobic.001G543100.2

Sobic.001G543100.2


Description : chromatin remodeling factor *(ALC1)


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.001G543100.2
Cluster HCAA Clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Bradi1g44177 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
HORVU1Hr1G019290.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g14406 No alias SYD, putative, expressed 0.02 Orthogroups_2024-Update
Mp5g06580.2 No alias chromatin remodeling factor (Snf2) 0.02 Orthogroups_2024-Update
Mp8g17660.1 No alias chromatin remodeling factor (Snf2) 0.02 Orthogroups_2024-Update
Seita.6G108300.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 58 348
IPR001650 Helicase_C 373 492
No external refs found!