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  5. Sobic.002G001700.1

Sobic.002G001700.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G001700.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_05911 No alias putative transcriptional regulator rabbit ears 0.02 Orthogroups_2024-Update
At3g58070 No alias GIS [Source:UniProtKB/TrEMBL;Acc:A0A178V7D1] 0.02 Orthogroups_2024-Update
At5g01860 No alias C2H2 and C2HC zinc fingers superfamily protein... 0.03 Orthogroups_2024-Update
At5g10970 No alias C2H2 and C2HC zinc fingers superfamily protein... 0.03 Orthogroups_2024-Update
Bradi4g01450 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Brara.E00257.1 No alias C2H2 subclass ZFP transcription factor 0.01 Orthogroups_2024-Update
Brara.F02973.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Brara.H02606.1 No alias transcriptional regulator *(JAG/NUB) & C2H2 subclass ZFP... 0.03 Orthogroups_2024-Update
Glyma.02G242600 No alias zinc finger protein 4 0.01 Orthogroups_2024-Update
Glyma.07G135900 No alias zinc-finger protein 10 0.01 Orthogroups_2024-Update
Glyma.07G174000 No alias zinc finger protein 4 0.01 Orthogroups_2024-Update
Glyma.12G230200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.01 Orthogroups_2024-Update
Glyma.18G042300 No alias zinc finger protein 4 0.06 Orthogroups_2024-Update
LOC_Os01g32920 No alias ZOS1-08 - C2H2 zinc finger protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os07g05900 No alias ZOS7-02 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
PSME_00003785-RA No alias (at3g07130 : 85.1) Encodes PAP15, a purple acid... 0.02 Orthogroups_2024-Update
Potri.016G101300 No alias C2H2 and C2HC zinc fingers superfamily protein 0.01 Orthogroups_2024-Update
Seita.6G179600.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G173300.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sopen05g004900 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!