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  5. Sobic.002G002700.1

Sobic.002G002700.1


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G002700.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
MA_46902g0010 No alias (at1g05200 : 769.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
Sobic.010G231300.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 509 843
IPR001320 Iontro_rcpt 844 876
IPR001828 ANF_lig-bd_rcpt 71 433
No external refs found!