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  5. Sobic.002G002800.1

Sobic.002G002800.1


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G002800.1

Target Alias Description ECC score Gene Family Method Actions
At2g29110 No alias Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074] 0.03 Orthogroups_2024-Update
At3g07520 No alias Glutamate receptor 1.4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGN1] 0.03 Orthogroups_2024-Update
Bradi4g30860 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 59 414
IPR001638 Solute-binding_3/MltF_N 519 847
IPR001320 Iontro_rcpt 848 881
No external refs found!