- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : synthase component of pyridoxal 5-phosphate synthase complex
Gene families : OG_42_0002804 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002804_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.002G005600.1 | |
| Cluster | HCAA Clusters: Cluster_214 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp1s350_40V6 | No alias | pyridoxine biosynthesis protein | 0.02 | Orthogroups_2024-Update | |
| Seita.J005500.1 | No alias | synthase component of pyridoxal 5-phosphate synthase complex | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Predicted GO |
| BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Predicted GO |
| BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
| BP | GO:0006848 | pyruvate transport | IEP | Predicted GO |
| BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Predicted GO |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Predicted GO |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
| BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
| BP | GO:0015718 | monocarboxylic acid transport | IEP | Predicted GO |
| BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| CC | GO:0019866 | organelle inner membrane | IEP | Predicted GO |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
| BP | GO:0031167 | rRNA methylation | IEP | Predicted GO |
| CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
| BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| BP | GO:0070475 | rRNA base methylation | IEP | Predicted GO |
| BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Predicted GO |
| BP | GO:0098656 | anion transmembrane transport | IEP | Predicted GO |
| BP | GO:1901475 | pyruvate transmembrane transport | IEP | Predicted GO |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Predicted GO |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Predicted GO |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033755 | PdxS/SNZ_N | 31 | 236 |
| No external refs found! |