1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G013000.1

Sobic.002G013000.1


Description : regulatory mediator of IRE1-bZIP60 UPR pathway


Gene families : OG_42_0000291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G013000.1
Cluster HCAA Clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Brara.B02882.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
HORVU5Hr1G022550.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.03 Orthogroups_2024-Update
MA_4522g0020 No alias (at4g24130 : 139.0) Protein of unknown function, DUF538;... 0.02 Orthogroups_2024-Update
PSME_00032119-RA No alias (at4g24130 : 139.0) Protein of unknown function, DUF538;... 0.03 Orthogroups_2024-Update
Seita.2G074600.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Seita.2G074800.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Seita.2G075400.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Seita.J023600.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Sobic.010G117500.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Sobic.010G117800.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Sobic.010G159100.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR007493 DUF538 27 139
No external refs found!