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  5. Sobic.002G022700.1

Sobic.002G022700.1


Description : 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.002G022700.1
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AC183932.3_FG007 No alias Cellulose-synthase-like C12 0.03 Orthogroups_2024-Update
Glyma.13G070300 No alias Cellulose-synthase-like C4 0.03 Orthogroups_2024-Update
Glyma.14G090000 No alias Cellulose-synthase-like C12 0.03 Orthogroups_2024-Update
MA_96942g0010 No alias (at5g03760 : 870.0) encodes a beta-mannan synthase that... 0.03 Orthogroups_2024-Update
PSME_00004636-RA No alias (at5g03760 : 500.0) encodes a beta-mannan synthase that... 0.01 Orthogroups_2024-Update
PSME_00054676-RA No alias (at4g31590 : 540.0) encodes a gene similar to cellulose... 0.01 Orthogroups_2024-Update
Potri.006G116900 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G270900 No alias Cellulose-synthase-like C5 0.03 Orthogroups_2024-Update
Potri.009G149700 No alias cellulose synthase-like A02 0.04 Orthogroups_2024-Update
Seita.2G024400.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.01 Orthogroups_2024-Update
Solyc04g077470 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASJ1_POPTO) 0.03 Orthogroups_2024-Update
Solyc10g083670 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO) 0.03 Orthogroups_2024-Update
Solyc11g066820 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ATP8_POPTO) 0.03 Orthogroups_2024-Update
Sopen10g033130 No alias Glycosyltransferase like family 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 331 529
No external refs found!