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  5. At3g45510

At3g45510


Description : RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q9M1F6]


Gene families : OG_42_0000330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g45510
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
At2g26130 No alias RBR-type E3 ubiquitin transferase... 0.02 Orthogroups_2024-Update
At3g45540 No alias RBR-type E3 ubiquitin transferase... 0.05 Orthogroups_2024-Update
Bradi4g30410 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s64_60V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Seita.8G001900.1 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) 0.03 Orthogroups_2024-Update
Solyc03g117860 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT3G14250.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 135 200
No external refs found!